Runs a doublet/multiplet identification algorithm on the SingleCellExperiment and returns a SingleCellExperiment annotated with is_singlet and, depending on the algorithm, additional annotations / dimensionality reductions.
find_singlets(sce, singlet_find_method, ...)a SingleCellExperiment object
the method to use for identifying singlets
additional parameters passed to singlet finding algorithm.
sce a SingleCellExperiment object annotated for singlets
Other annotation functions:
.preprocess_seurat_object(),
annotate_celltype_metrics(),
annotate_integrated_sce(),
annotate_merged_sce(),
annotate_sce(),
annotate_sce_cells(),
annotate_sce_genes(),
filter_sce(),
find_cells(),
generate_sce(),
map_ensembl_gene_id(),
merge_sce(),
read_metadata(),
report_celltype_metrics(),
report_celltype_model(),
report_merged_sce(),
report_qc_sce(),
run_doubletfinder(),
sce_to_seu()