Preprocess the SCE for DE analysis

Subset genes, set factor reference level, and optionally pseudobulk

.preprocess_sce_for_de(...)

Arguments

...

Value

sce a SingleCellExperiment object

See also

Other differential gene expression: .filter_sce_genes_for_de(), .generate_model_from_vars(), .perform_de_with_mast(), perform_de(), pseudobulk_sce(), report_de(), volcano_plot()